https://ogma.newcastle.edu.au/vital/access/ /manager/Index en-au 5 Fine-mapping of 150 breast cancer risk regions identifies 191 likely target genes https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:41408 Tue 21 Mar 2023 18:03:04 AEDT ]]> Association of a common AKAP9 variant with breast cancer risk: a collaborative analysis https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:5128 T and N2792S, 8375A>G) to be associated with an allele dose–dependent increase in risk of familial breast cancer in a German population. We extended the analysis of AKAP9 M463I, which is in strong linkage disequilibrium with AKAP9 N2792S, to 9523 breast cancer patients and 13 770 healthy control subjects from seven independent European and Australian breast cancer studies. All statistical tests were two-sided. The collaborative analysis confirmed the association of M463I with increased breast cancer risk. Among all breast cancer patients, the combined adjusted odds ratio (OR) of breast cancer for individuals homozygous for the rare allele TT (frequency = 0.19) compared with GG homozygotes was 1.17 (95% confidence interval [CI] = 1.08 to 1.27, P = .0003), and the OR for TT homozygotes plus GT heterozygotes compared with GG homozygotes was 1.10 (95% CI = 1.04 to 1.17, P = .001). Among the combined subset of 2795 familial breast cancer patients, the respective ORs were 1.27 (95% CI = 1.12 to 1.45, P = .0003) and 1.16 (95% CI = 1.06 to 1.27, P = .001).]]> Sat 24 Mar 2018 07:48:55 AEDT ]]> Genome-wide association study identifies novel breast cancer susceptibility loci https://ogma.newcastle.edu.au/vital/access/ /manager/Repository/uon:3776 0.5. SNPs in five novel independent loci exhibited strong and consistent evidence of association with breast cancer (P < 10⁻⁷). Four of these contain plausible causative genes (FGFR2, TNRC9, MAP3K1 and LSP1). At the second stage, 1,792 SNPs were significant at the P < 0.05 level compared with an estimated 1,343 that would be expected by chance, indicating that many additional common susceptibility alleles may be identifiable by this approach.]]> Sat 24 Mar 2018 07:21:45 AEDT ]]>